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  1. evo2 evo2 Public

    Genome modeling and design across all domains of life

    Jupyter Notebook 3.8k 482

  2. state state Public

    State is a machine learning model that predicts cellular perturbation response across diverse contexts

    Python 564 153

  3. arc-virtual-cell-atlas arc-virtual-cell-atlas Public

    Arc Virtual Cell Atlas

    Jupyter Notebook 513 51

  4. SRAgent SRAgent Public

    LLM agents for working with the SRA and associated bioinformatics databases.

    Python 165 33

  5. cell-eval cell-eval Public

    Comprehensive suite for evaluating perturbation prediction models

    Python 125 44

  6. stack stack Public

    Stack is a single-cell foundation model that enables in-context learning at inference time.

    Jupyter Notebook 123 19

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